All Publications

  • miR-17-92 and miR-106b-25 clusters regulate beta cell mitotic checkpoint and insulin secretion in mice

    Authors: Mandelbaum A. D., Kredo-Russo S., Aronowitz D., Myers N., Yanowski E., Klochendler A., Swisa A., Dor Y. & Hornstein E. (2019), Diabetologia. 62, 9, p. 1653-1666
  • Pro-inflammatory Cytokines Alter the Immunopeptidome Landscape by Modulation of HLA-B Expression

    Authors: Javitt A., Barnea E., Kramer M. P., Wolf-Levy H., Levin Y., Admon A. & Merbl Y. (2019), Frontiers in Immunology. 10, 141
  • Chlorophyll catabolism precedes changes in chloroplast structure and proteome during leaf senescence

    Authors: Tamary E., Nevo R., Naveh L., Levin-Zaidman S., Kiss V., Savidor A., Levin Y., Eyal Y., Reich Z. & Adam Z. (2019), Plant Direct. 3, 3, 00127
  • Unraveling essential cellulosomal components of the (Pseudo)Bacteroides cellulosolvens reveals an extensive reservoir of novel catalytic enzymes

    Authors: Zhivin-Nissan O., Dassa B., Morag E., Kupervaser M., Levin Y. & Bayer E. A. (2019), Biotechnology for Biofuels. 12, 115
  • Rapid characterization of secreted recombinant proteins by native mass spectrometry

    Authors: Ben-Nissan G., Vimer S., Warszawski S., Katz A., Yona M., Unger T., Peleg Y., Morgenstern D., Cohen-Dvashi H., Diskin R., Fleishman S. J. & Sharon M. (2018), Communications biology. 1, 213
  • Revealing the cellular degradome by mass soectrometry analysis of proteasome-cleaved peptides

    Authors: Wolf-Levy H., Javitt A., Eisenberg-Lerner A., Kacenl A., Ulman A., Sheban D., Dassa B., Fishbain-Yoskovitz V., Carmona-Rivera C., Kramer M. P., Nudel N., Regevl I., Zahavi L., Elinger D., Kaplan M. J., Morgenstern D., Levin Y. & Merbl Y. (2018), Nature Biotechnology. 36, 11, p. 1110-1116
  • The Xanthomonas euvesicatoria type III effector XopAU is an active protein kinase that manipulates plant MAP kinase signaling

    Authors: Teper D., Girija A. M., Bosis E., Popov G., Savidor A. & Sessa G. (2018), PLoS Pathogens. 14, 1, 1006880
  • CAPN1 is a novel binding partner and regulator of the tumor suppressor NF1 in melanoma

    Authors: Alon M., Arafeh R., Lee J. S., Madan S., Kalaora S., Nagler A., Abgarian T., Greenberg P., Ruppin E. & Samuels Y. (2018), Oncotarget. 9, 58, p. 31264-31277
  • The Disordered Landscape of the 20S Proteasome Substrates Reveals Tight Association with Phase Separated Granules

    Authors: Myers N., Olender T., Savidor A., Levin Y., Reuven N. & Shaul Y. (2018), Proteomics. 18, 21-22, 1800076
  • Triple-Stage Mass Spectrometry Unravels the Heterogeneity of an Endogenous Protein Complex

    Authors: Ben-Nissan G., Belov M. E., Morgenstern D., Levin Y., Dym O., Arkind G., Lipson G., Makarov A. A. & Sharon M. (2017), Analytical Chemistry. 89, 8, p. 4708-4715
  • Database-independent Protein Sequencing (DiPS) Enables Full-length de Novo Protein and Antibody Sequence Determination

    Authors: Savidor A., Barzilay R., Elinger D., Yarden Y., Lindzen M., Gabashvili A., Tal O. A. & Levin Y. (2017), Molecular & Cellular Proteomics. 16, 6, p. 1151-1161
  • Diadenosine tetraphosphate (Ap4A) - an E-coli alarmone or a damage metabolite?

    Authors: Despotovic D., Brandis A., Savidor A., Levin Y., Fumagalli L. & Tawfik D. (2017), FEBS Journal. 284, 14, p. 2194-2215
  • BcXYG1, a Secreted Xyloglucanase from Botrytis cinerea, Triggers Both Cell Death and Plant Immune Responses

    Authors: Zhu W., Ronen M., Gur Y., Minz-Dub A., Masrati G., Ben-Tal N., Savidor A., Sharon I., Eizner E., Valerius O., Braus G. H., Bowler K., Bar-Peled M. & Sharon A. (2017), Plant Physiology. 175, 1, p. 438-456
  • Seasonal heat stress affects adipose tissue proteome toward enrichment of the Nrf2-mediated oxidative stress response in late-pregnant dairy cows

    Authors: Zachut M., Kra G., Livshitz L., Portnick Y., Yakoby S., Friedlander G. & Levin Y. (2017), Journal of Proteomics. 158, p. 52-61
  • Label-free deep shotgun proteomics reveals protein dynamics during tomato fruit tissues development

    Authors: Szymanski J., Levin Y., Savidor A., Breitel D., Chappell-Maor L., Heinig U., Toepfer N. & Aharoni A. (2017), Plant Journal. 90, 2, p. 396-417
  • The genetic basis for the adaptation of E-coli to sugar synthesis from CO2

    Authors: Herz E., Antonovsky N., Bar-On Y., Davidi D., Gleizer S., Prywes N., Noda-Garcia L., Frisch K. L., Zohar Y., Wernick D. G., Savidor A., Barenholz U. & Milo R. (2017), Nat Commun. 8, 1705
  • Dynamics of Hippocampal Protein Expression During Long-term Spatial Memory Formation

    Authors: Borovok N., Nesher E., Levin Y., Reichenstein M., Pinhasov A. & Michaelevski I. (2016), Molecular & Cellular Proteomics. 15, 2, p. 523-541
  • Small secreted proteins enable biofilm development in the cyanobacterium Synechococcus elongatus.

    Authors: Parnasa R., Nagar E., Sendersky E., Reich Z., Simkovsky R., Golden S. & Schwarz R. (2016), Scientific Reports. 6, 32209
  • Efficiency in Complexity: Composition and Dynamic Nature of Mimivirus Replication Factories

    Authors: Fridmann Sirkis S. Y., Milrot E., Mutsafi Y., Ben-Dor S., Levin Y., Savidor A. & Kartvelishvily E. (2016), Journal of Virology. 90, 21, p. 10039-10047
  • Distinct biological events generated by ECM proteolysis by two homologous collagenases

    Authors: Solomonov I., Zehorai E., Talmi-Frank D., Wolf S. G., Shainskaya A., Zhuravlev A., Kartvelishvily E., Visse R., Levin Y., Kampf N., Jaitin D. A., David E., Amit I., Nagase H. & Sagi I. (2016), Proceedings of the National Academy of Sciences of the United States of America. 113, 39, p. 10884-10889
  • Adipose-Induced Retroperitoneal Soft Tissue Sarcoma Tumorigenesis: A Potential Crosstalk between Sarcoma and Fat Cells

    Authors: Loewenstein S., Lubezky N., Nizri E., Zemel M., Levin Y., Savidor A., Sher O., Klausner J. & Lahat G. (2016), Molecular Cancer Research. 14, 12, p. 1254-1265
  • Cross-linking reveals laminin coiled-coil architecture

    Authors: Armony G., Jacob E., Moran T., Levin Y., Mehlman T., Levy Y. & Fass D. (2016), Proceedings of the National Academy of Sciences of the United States of America. 113, 47, p. 13384-13389
  • Chronic Iron Limitation Confers Transient Resistance to Oxidative Stress in Marine Diatoms

    Authors: van Creveld C. S., Rosenwasser S., Levin Y. & Vardi A. (2016), Plant Physiology. 172, 2, p. 968-979
  • Proteomic analysis of preovulatory follicular fluid reveals differentially abundant proteins in less fertile dairy cows

    Authors: Zachut M., Sood P., Levin Y. & Moallem U. (2016), Journal of Proteomics. 139, p. 122-129
  • In planta anthocyanin degradation by a vacuolar class III peroxidase in Brunfelsia calycina flowers

    Authors: Zipor G., Duarte P., Carqueijeiro I., Shahar L., Ovadia R., Teper-Bamnolker P., Eshel D., Levin Y., Doron-Faigenboim A., Sottomayor M. & Oren-Shamir M. (2015), New Phytologist. 205, 2, p. 653-665
  • Identification of a Biomarker in Cerebrospinal Fluid for Neuronopathic Forms of Gaucher Disease

    Authors: Zigdon H., Savidor A., Levin Y., Meshcheriakova A., Schiffmann R. & Futerman A. H. (2015), PLoS One. 10, 3, e0120194
  • Synapsin IIb as a functional marker of submissive behavior

    Authors: Nesher E., Koman I., Gross M., Tikhonov T., Bairachnaya M., Salmon-Divon M., Levin Y., Gerlitz G., Michaelevski I., Yadid G. & Pinhasov A. (2015), Scientific Reports. 5, 10287
  • MS1-Based Label-Free Proteomics Using a Quadrupole Orbitrap Mass Spectrometer

    Authors: Shalit T., Elinger D., Savidor A., Gabashvili A. & Levin Y. (2015), Journal of Proteome Research. 14, 4, p. 1979-1986
  • Disturbance of the bacterial cell wall specifically interferes with biofilm formation.

    Authors: Bucher T., Oppenheimer-Shaanan Y., Savidor A., Bloom-Ackermann Z. & Kolodkin-Gal I. (2015), Environmental Microbiology Reports. 7, 6, p. 990-1004
  • Drift time-specific collision energies enable deep-coverage data-independent acquisition proteomics

    Authors: Distler U., Kuharev J., Navarro P., Levin Y., Schild H. & Tenzer S. (2014), Nature Methods. 11, 2, p. 167-+
  • Mapping the diatom redox-sensitive proteome provides insight into response to nitrogen stress in the marine environment

    Authors: Rosenwasser S., van Creveld C. S. G., Schatz D., Malitsky S., Tzfadia O., Aharoni A., Levin Y., Gabashvili A., Feldmesser E. & Vardi A. (2014), Proceedings of the National Academy of Sciences of the United States of America. 111, 7, p. 2740-2745
  • Dynamic Regulation of the COP9 Signalosome in Response to DNA Damage

    Authors: Fuzesi-Levi M. G., Ben-Nissan G., Bianchi E., Zhou H., Deery M. J., Lilley K. S., Levin Y. & Sharon M. (2014), Molecular and Cellular Biology. 34, 6, p. 1066-1076
  • Changes in atmospheric CO2 influence the allergenicity of Aspergillus fumigatus

    Authors: Lang Yona N., Levin Y., Dannemiller K. C., Yarden O., Peccia J. & Rudich Y. (2013), Global Change Biology. 19, 8, p. 2381-2388
  • Chimeras taking shape: Potential functions of proteins encoded by chimeric RNA transcripts

    Authors: Frenkel-Morgenstern M., Lacroix V., Ezkurdia I., Levin Y., Gabashvili A., Prilusky J., del Pozo P. A., Tress M., Johnson R., Guigo R. & Valencia A. (2012), Genome Research. 22, 7, p. 1231-1242
  • Analysis of the rat hypothalamus proteome by data-independent label-free LC-MS/MS

    Authors: Stelzhammer V., Amess B., Martins-de-Souza D., Levin Y., Ozanne S. E., Martin-Gronert M. S., Urday S., Bahn S. & Guest P. C. (2012), Proteomics. 12, 22, p. 3386-3392
  • Design and Application of a Data-Independent Precursor and Product Ion Repository

    Authors: Thalassinos K., Vissers J. P. C., Tenzer S., Levin Y., Thompson J. W., Daniel D., Mann D., DeLong M. R., Moseley M. A., America A. H., Ottens A. K., Cavey G. S., Efstathiou G., Scrivens J. H., Langridge J. I. & Geromanos S. J. (2012), Journal of the American Society for Mass Spectrometry. 23, 10, p. 1808-1820
  • Quantification of proteins using data-independent analysis (MSE) in simple and complex samples: A systematic evaluation

    Authors: Levin Y., Hradetzky E. & Bahn S. (), Proteomics. 11, 16, p. 3273-3287
  • CSNAP Is a Stoichiometric Subunit of the COP9 Signalosome

    Authors: Rozen S., Sharon M., Fuzesi-Levi M. G., Ben-Nissan G., Mizrachi L., Gabashvili A., Levin Y., Ben-Dor S. & Eisenstein M. (), Cell Reports. 13, 3, p. 585-598
  • Dysregulated miRNA biogenesis downstream of cellular stress and ALS-causing mutations: a new mechanism for ALS.

    Authors: Emde A., Eitan C., Liou L., Libby R. T., Rivkin N., Magen I., Reichenstein I., Oppenheim H., Eilam R., Silvestroni A., Alajajian B., Ben-Dov I. Z., Aebischer J., Savidor A., Levin Y., Sons R., Hammond S. M., Ravits J. M., Moller T. & Hornstein E. (), The EMBO Journal. 34, 21, p. 2633-51
  • Microbiota-Modulated Metabolites Shape the Intestinal Microenvironment by Regulating NLRP6 Inflammasome Signaling.

    Authors: Levy M., Thaiss C. A., Zeevi D., Dohnalova L., Zilberman-Schapira G., Mahdi J. A., David E., Savidor A., Korem T., Herzig Y., Pevsner-Fischer M., Shapiro H., Christ A., Harmelin A., Halpern Z., Latz E., Flavell R. A., Amit I., Segal E. & Elinav E. (), Cell. 163, 6, p. 1428-1443
  • Identification of the algal dimethyl sulfide-releasing enzyme: A missing link in the marine sulfur cycle

    Authors: Alcolombri U., Ben-Dor S., Feldmesser E., Levin Y., Tawfik D. & Vardi A. (), Science. 348, 6242, p. 1466-1469
  • Sugar Synthesis from CO2 in Escherichia coli

    Authors: Antonovsky N., Gleizer S., Noor E., Zohar Y., Herz E., Barenholz U., Zelcbuch L., Amram S., Wides A., Tepper N., Davidi D., Bar-On Y., Bareia T., Wernick D. G., Shani I., Malitsky S., Jona G., Bar-Even A. & Milo R. (), Cell. 166, 1, p. 115-125
  • Principles of cellular resource allocation revealed by condition-dependent proteome profiling

    Authors: Metzl-Raz E., Kafri M., Yaakov G., Soifer I., Gurvich Y. & Barkai N. (), eLife. 6, e28034
  • Degradation of Bcl-2 by XIAP and ARTS Promotes Apoptosis

    Authors: Edison N., Curtz Y., Paland N., Mamriev D., Chorubczyk N., Haviv-Reingewertz T., Kfir N., Morgenstern D., Kupervaser M., Kagan J., Kim H. T. & Larisch S. (), Cell Reports. 21, 2, p. 442-454
  • Communication between viruses guides lysis-lysogeny decisions

    Authors: Erez Z., Steinberger-Levy I., Shamir M., Doron S., Stokar Avihail A. A., Peleg Y., Melamed S., Leavitt A., Savidor A., Albeck S., Amitai G. & Sorek R. (), Nature. 541, 7638
  • Neutralizing Gatad2a-Chd4-Mbd3/NuRD Complex Facilitates Deterministic Induction of Naive Pluripotency

    Authors: Mor N., Rais Y., Sheban D., Peles S., Aguilera-Castrejon A., Zviran A., Elinger D., Viukov S., Geula S., Krupalnik V., Zerbib M., Chomsky E., Lasman L., Shani T., Bayerl J., Gafni O., Hanna S., Buenrostro J. D., Hagai T., Masika H., Vainorius G., Bergman Y., Greenleaf W. J., Esteban M. A., Elling U., Levin Y., Massarwa R., Merbl Y., Novershtern N. & Hanna J. H. (), Cell Stem Cell. 23, 3, p. 412-425.e10
  • UVB-Induced Tumor Heterogeneity Diminishes Immune Response in Melanoma

    Authors: Wolf Y., Bartok O., Patkar S., Eli G. B., Cohen S., Litchfield K., Levy R., Jiménez-Sánchez A., Trabish S., Lee J. S., Karathia H., Barnea E., Day C., Cinnamon E., Stein I., Solomon A., Bitton L., Pérez-Guijarro E., Dubovik T., Shen-Orr S. S., Miller M. L., Merlino G., Levin Y., Pikarsky E., Eisenbach L., Admon A., Swanton C., Ruppin E. & Samuels Y. (), Cell. 179, 1, p. 219-235