All Publications

  • Deterministic Somatic Cell Reprogramming Involves Continuous Transcriptional Changes Governed by Myc and Epigenetic-Driven Modules

    Asaf Zviran; Nofar Mor; Yoach Rais; Hila Gingold; Shani Peles; Elad Chomsky; Sergey Viukov; Jason D. Buenrostro; Roberta Scognamiglio; Leehee Weinberger; Yair S. Manor; Vladislav Krupalnik; Mirie Zerbib; Hadas Hezroni; Diego Adhemar Jaitin; David Larastiaso; Shlomit Gilad; Sima Benjamin; Ohad Gafni; Awni Mousa; Muneef Ayyash; Daoud Sheban; Jonathan Bayerl; Alejandro Aguilera-Castrejon; Rada Massarwa; Itay Maza; Suhair Hanna; Yonatan Stelzer; Igor Ulitsky; William J. Greenleaf; Amos Tanay; Andreas Trumpp; Ido Amit; Yitzhak Pilpel; Noa Novershtern; Jacob H. Hanna (2019)
  • mRNA-seq whole transcriptome profiling of fresh frozen versus archived fixed tissues

    Noa Bossel Ben-Moshe; Shlomit Gilad; Gili Perry; Sima Benjamin; Nora Balint-Lahat; Anya Pavlovsky; Sharon Halperin; Barak Markus; Ady Yosepovich; Iris Barshack; Einav Nili Gal-Yam; Eytan Domany; Bella Kaufman; Maya Dadiani (2018)
  • High Expression of CD200 and CD200R1 Distinguishes Stem and Progenitor Cell Populations within Mammary Repopulating Units

    Gat Rauner; Tania Kudinov; Shlomit Gilad; Gil Hornung; Itamar Barash (2018)
  • A brief review of single-cell transcriptomic technologies

    Tomer Kalisky; Sarit Oriel; Tali Hana Bar-Lev; Nissim Ben-Haim; Ariel Trink; Yishay Wineberg; Itamar Kanter; Shlomit Gilad; Saumyadipta Pyne (2018)
  • Quantitative species-level ecology of reef fish larvae via metabarcoding

    Naama Kimmerling; Omer Zuqert; Gil Amitai; Tamara Gurevich; Rachel Armoza-Zvuloni; Irina Kolesnikov; Igal Berenshtein; Sarah Melamed; Shlomit Gilad; Sima Benjamin; Asaph Rivlin; Moti Ohavia; Claire B. Paris; Roi Holzman; Moshe Kiflawi; Rotem Sorek (2018)
  • Evolution and dissemination of the Klebsiella pneumoniae clonal group 258 throughout Israeli post-acute care hospitals, 2008-13

    Amos Adler; Ziv Lifshitz; Michal Gordon; Debbie Ben-David; Efrat Khabra; Samira Masarwa; Orit Zion; Mitchell J. Schwaber; Yehuda Carmeli (2017)
  • Coordination of Meristem Doming and the Floral Transition by Late Termination, a Kelch Repeat Protein

    Lior Tal; Gilgi Friedlander; Netta Segal Gilboa; Tamar Unger; Shlomit Gilad; Yuval Eshed (2017)
  • RNA sequencing of bipolar disorder lymphoblastoid cell lines implicates the neurotrophic factor HRP-3 in lithium's clinical efficacy

    Elena Milanesi; Irena Voinsky; Adva Hadar; Ala Srouji; Carlo Maj; Tatyana Shekhtman; Michael Gershovits; Shlomit Gilad; Caterina Chillotti; Alessio Squassina; James B Potash; Thomas G Schulze; Fernando S Goes; Peter Zandi; John R Kelsoe; David Gurwitz (2017)
  • High-Resolution Dissection of Conducive Reprogramming Trajectory to Ground State Pluripotency

    Asaf Zviran; Nofar Mor; Yoach Rais; Hila Gingold; Shani Peles; Elad Chomsky; Sergey Viukov; Jason D. Buenrostro; Leehee Weinberger; Yair S. Manor; Vladislav Krupalnik; Mirie Zerbib; Hadas Hezroni; Diego Adhemar Jaitin; David Larastiaso; Shlomit Gilad; Sima Benjamin; Awni Mousa; Muneef Ayyash; Daoud Sheban; Jonathan Bayerl; Alejandro Aguilera Castrejon; Rada Massarwa; Itay Maza; Suhair Hanna; Ido Amit; Yonatan Stelzer; Igor Ulitsky; William J. Greenleaf; Yitzhak Pilpel; Noa Novershtern; Jacob H. Hanna (2017)
  • Derivation of novel human ground state naive pluripotent stem cells (vol 504, pg 282, 2013)

    Ohad Gafni; Leehee Weinberger; Abed AlFatah Mansour; Yair S. Manor; Elad Chomsky; Dalit Ben-Yosef; Yael Kalma; Sergey Viukov; Itay Maza; Asaf Zviran; Yoach Rais; Zohar Shipony; Zohar Mukamel; Vladislav Krupalnik; Mirie Zerbib; Shay Geula; Inbal Caspi; Dan Schneir; Tamar Shwartz; Shlomit Gilad; Daniela Amann-Zalcenstein; Sima Benjamin; Ido Amit; Amos Tanay; Rada Massarwa; Noa Novershtern; Jacob H. Hanna (2015)
  • Deterministic direct reprogramming of somatic cells to pluripotency (vol 502, pg 65, 2013)

    Yoach Rais; Asaf Zviran; Shay Geula; Ohad Gafni; Elad Chomsky; Sergey Viukov; Abed AlFatah Mansour; Inbal Caspi; Vladislav Krupalnik; Mirie Zerbib; Itay Maza; Nofar Mor; Dror Baran; Leehee Weinberger; Diego A. Jaitin; David Lara-Astiaso; Ronnie Blecher-Gonen; Zohar Shipony; Zohar Mukamel; Tzachi Hagai; Shlomit Gilad; Daniela Amann-Zalcenstein; Amos Tanay; Ido Amit; Noa Novershtern; Jacob H. Hanna (2015)
  • Simultaneous measurement of genome-wide transcription elongation speeds and rates of RNA polymerase II transition into active elongation with 4sUDRB-seq

    Gilad Fuchs; Yoav Voichek; Michal Rabani; Sima Benjamin; Shlomit Gilad; Ido Amit; Moshe Oren (2015)
  • Artificial Sweeteners Induce Glucose Intolerance by Altering the Gut Microbiota EDITORIAL COMMENT

    Jotham Suez; Tal Korem; David Zeevi; Gili Zilberman-Schapira; Christoph Alexander Thaiss; Ori Maza; David Israeli; Niv Zmora; Shlomit Gilad; Adina Weinberger; Yael Kuperman; Alon Harmelin; Ilana Kolodkin-Gal; Hagit Shapiro; Zamir Halpern; Eran Segal; Eran Elinav (2015)
  • Artificial sweeteners induce glucose intolerance by altering the gut microbiota

    Jotham Suez; Tal Korem; David Zeevi; Gili Zilberman-Schapira; Christoph Alexander Thaiss; Ori Maza; David Israeli; Niv Zmora; Shlomit Gilad; Adina Weinberger; Yael Kuperman; Alon Harmelin; Ilana Kolodkin-Gal; Hagit Shapiro; Zamir Halpern; Eran Segal; Eran Elinav (2014)
  • 4sUDRB-seq: measuring genomewide transcriptional elongation rates and initiation frequencies within cells

    Gilad Fuchs; Yoav Voichek; Sima Benjamin; Shlomit Gilad; Ido Amit; Moshe Oren (2014)
  • Transkingdom Control of Microbiota Diurnal Oscillations Promotes Metabolic Homeostasis

    Christoph Alexander Thaiss; David Zeevi; Maayan Levy; Gili Zilberman-Schapira; Jotham Suez; Anouk C. Tengeler; Lior Abramson; Meirav N. Katz; Tal Korem; Niv Zmora; Yael Kuperman; Inbal Biton; Shlomit Gilad; Alon Harmelin; Hagit Shapiro; Zamir Halpern; Eran Segal; Eran Elinav (2014)
  • Derivation of novel human ground state naive pluripotent stem cells

    Ohad Gafni; Leehee Weinberger; Abed AlFatah Mansour; Yair S. Manor; Elad Chomsky; Dalit Ben-Yosef; Yael Kalma; Sergey Viukov; Itay Maza; Asaf Zviran; Yoach Rais; Zohar Shipony; Zohar Mukamel; Vladislav Krupalnik; Mirie Zerbib; Shay Geula; Inbal Caspi; Dan Schneir; Tamar Shwartz; Shlomit Gilad; Daniela Amann Zalcenstein; Sima Benjamin; Ido Amit; Amos Tanay; Rada Massarwa; Noa Novershtern; Jacob (Yaqub) Hanna (2013)
  • Alternative Splicing Regulates Biogenesis of miRNAs Located across Exon-Intron Junctions

    Ze'ev Melamed; Asaf Levy; Reut Ashwal-Fluss; Galit Lev-Maor; Keren Mekahel; Nir Atias; Shlomit Gilad; Roded Sharan; Carmit Levy; Sebastian Kadener; Gil Ast (2013)
  • Deterministic direct reprogramming of somatic cells to pluripotency

    Yoach Rais; Asaf Zviran; Shay Geula; Ohad Gafni; Elad Chomsky; Sergey Viukov; Abed AlFatah Mansour; Inbal Caspi; Vladislav Krupalnik; Mirie Zerbib; Itay Maza; Nofar Mor; Dror Baran; Leehee Weinberger; Diego A. Jaitin; Astiaso, David Lara Astiaso; Ronnie Blecher-Gonen; Zohar Shipony; Zohar Mukamel; Tzachi Hagai; Shlomit Gilad; Daniela Amann Zalcenstein; Amos Tanay; Ido Amit; Noa Novershtern; Jacob (Yaqub) Hanna (2013)
  • Methods and compositions for diagnosing complications of pregnancy

    Yaron Goren; Shlomit Gilad; Moshe Hod; Yariv Yogev (2013)
  • Classification of the Four Main Types of Lung Cancer Using a MicroRNA-Based Diagnostic Assay

    Shlomit Gilad; Gila Lithwick-Yanai; Iris Barshack; Sima Benjamin; Irit Krivitsky; Tina Bocker Edmonston; Marluce Bibbo; Craig Thurm; Laurie Horowitz; Yajue Huang; Meora Feinmesser; J. Steve Hou; Brianna St Cyr; Ilanit Burnstein; Hadas Gibori; Nir Dromi; Mats Sanden; Michal Kushnir; Ranit Aharonov (2012)
  • Vaccinia virus infection suppresses the cell microRNA machinery

    Moran Grinberg; Shlomit Gilad; Eti Meiri; Asaf Levy; Ofer Isakov; Roy Ronen; Noam Shomron; Zvi Bentwich; Yonat Shemer-Avni (2012)